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Package lists and other questions about the site
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r packages
importing
8.1 years ago
george.carlisle
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Please help me with the error of " installation of package had non-zero exit status"
bioconductor
r packages
installation
updated 7.9 years ago by
Martin Morgan
25k • written 7.9 years ago by
Sara
▴ 10
3
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3
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1.3k
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makeVRangesFromGRanges throws coercing "factor" to "NA" error
r packages
somaticsignatures
variantannotation
updated 7.8 years ago by
Martin Morgan
25k • written 7.9 years ago by
solo7773
▴ 10
4
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4
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7.7k
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Problems install R XML package on CentOS 7
r packages
centos7
bioclite
libxml2
updated 6.7 years ago by
Pariksheet Nanda
▴ 120 • written 6.7 years ago by
kai.karius
▴ 10
0
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0
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792
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AnalysisPageServer embedded hyperlinks
R
annotation
bioconductor
r packages
7.9 years ago
mcaulfield
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6
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2.0k
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Help to find Volunteer who can review my bioconductor package before submission ?
r packages
submission
8.2 years ago
Jurat Shahidin
▴ 80
2
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10
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6.0k
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Install older specific version from an R package that is on the Bioconductor Repository
Bioconductor
biocLite
R packages
oldversion
8.5 years ago
svlachavas
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Comment: deseq2 results
by
sajadahmad41454
• 0
could you please tell me if the results are fine or not? ![pca summary][1] ![pca plot][2] [1]: /media/images/ee7d8693-bcbe-4a7a-a566-d3…
Answer: normalization using Deseq2
by
ATpoint
★ 4.1k
counts(dds, normalized=TRUE)
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
Hi Michael, I have tried what you suggested. I started with methylation loci. I created segment1 and segment2 but how to combine them bec…
Comment: EGSEA usage with microarray data (with vooma)?
by
Chris
• 0
Hi Pekka, I also try EGSEA with microarray data. However, I got this error. Would you please have a suggestion? gsa = egsea.ma(numeric…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
> Any suggestions for methylation data segmentation? I think the same segmentation can be used.
Votes
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: minfi latest update for EPIC V2 chip
A: Error in DESeqDataSet : some values in assay are not integers
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